Biomedical Computer Science and Mechatronics

Publications 2023/2024

Full Papers

Fischer, G., Haueisen, J., Baumgarten, D., Kofler, M. Spectral separation of evoked and spontaneous cortical activity, Part 2: Somatosensory high frequency oscillations. Biomedical Signal Processing and Control. 2024; 95:106456. doi: 10.1016/j.bspc.2024.106456. Link zur Publikation

Esch, L., Dong, J., Hämäläinen, M., Baumgarten, D., Haueisen, J., Vorwerk, J. Online functional connectivity analysis of large all-to-all networks in MNE Scan. Imaging Neuroscience. 2024; 2:1-24. doi: 10.1162/imag_a_00296. Link zur Publikation

Fischer, G., Haueisen, J., Baumgarten, D., Kofler, M. Spectral separation of evoked and spontaneous cortical activity, Part 1: Delta to high gamma band. Biomedical Signal Processing and Control. 2024; 92:106094. doi: 10.1016/j.bspc.2024.106094. Link zur Publikation

Dornauer, V., Netzer, M., Kaczko, E., Norz, L., Ammenwerth, E. Automatic Classification of Online Discussions and Other Learning Traces to Detect Cognitive Presence. International Journal of Artificial Intelligence in Education. 2024; 34 (2):395-415. doi: 10.1007/S40593-023-00335-4. Link zur Publikation

Jaufenthaler, A., Sander, T., Schier, P., Pansegrau, K., Wiekhorst, F., Baumgarten, D. Human head sized magnetorelaxometry imaging of magnetic nanoparticles with optically pumped magnetometers – A feasibility study. Journal of Magnetism and Magnetic Materials. 2024; 596:171983. doi: 10.1016/j.jmmm.2024.171983. Link zur Publikation

Vorwerk, J., Wolters, C., Baumgarten, D. Global sensitivity of EEG source analysis to tissue conductivity uncertainties. Frontiers in Human Neuroscience. 2024; 18:1335212. doi: 10.3389/fnhum.2024.1335212. Link zur Publikation

Schweitzer, R., Schlögl, S., Schweitzer, M. Technology-Supported Behavior Change—Applying Design Thinking to mHealth Application Development. European Journal of Investigation in Health Psychology and Education. 2024; 14 (3):584-608. doi: 10.3390/ejihpe14030039. Link zur Publikation

Fischer, G., Kofler, M., Baumgarten, D. Implementation of N-Interval Fourier Transform Analysis – Application to Compound Action Potentials. MethodsX. 2023; 11:102441. doi: 10.1016/j.mex.2023.102441. Link zur Publikation

Maurer, M., Baumgarten, D., Vorwerk, J. Comparison of CNN-based EEG Classification in Sensor and Source Space. Proceedings of the 9th Graz Brain-Computer Interface Conference 2024. 2024: 289-294. doi: 10.3217/978-3-99161-014-4-051. Link zur Publikation

Ostheimer, P., Lins, A., Steger, B., Romano, V., Augustin, M., Baumgarten, D. Baseline Pipeline for Automated Eye Redness Extraction with Relation to Clinical Grading. Proceedings, German Conference on Medical Image Computing 2024. Erlangen: Springer; 2024: 80. 

 

Conference Contributions

Vorwerk, J., Wolters, C., Baumgarten, D. Global Sensitivity of MEG Source Analysis to Tissue Conductivity Uncertainties. Vortrag. 58th DGBMT Annual Conference on Biomedical Engineering (BMT 2024), Stuttgart, Deutschland; 2024. 

Deeb, T., Handler, M., Baumgarten, D., Glasmacher, B. Development and analysis of a novel semi passive approach for controlled rate freezing in the field of cryopreservation. Poster. BMT 2024 – 58th Annual Conference of the German Society for Biomedical Engineering, Stuttgart, Deutschland; 2024. 

Fischer, G., Baumgarten, D., Kofler, M. First Experience with Novel Digital Signal-to-Noise Management of Median Nerve Somatosensory Evoked Potentials. Vortrag. 33rd International Congress on Neurophysiology, Jakarta, Indonesien; 2024.

Fischer, G., Baumgarten, D., Kofler, M. Assessment of Evoked and Spontaneous near 600 Hz HFOs by N-FTA. Vortrag. 33rd International Congress on Neurophysiology, Jakarta, Indonesien; 2024. 

Jaufenthaler, A., Baumgarten, D. Towards unshielded magnetorelaxometry imaging with optically pumped magnetometers. Vortrag. BMT 2024 – 58th Annual Conference of the German Society for Biomedical Engineering, Stuttgart, Deutschland; 2024. 

Vorwerk, J., Wolters, C., Baumgarten, D. Benefit of EEG/MEG Skull Conductivity Calibration for Epilepsy-Typical Sources. Vortrag. 23rd International Conference on Biomagnetism (Biomag 2024), Sydney, Australien; 2024. 

Mitra, M., Jaufenthaler, A., Baumgarten, D., Birkl, C. Magnetic Resonance imaging of Magnetic Nanoparticles and quantification performance study for Magnetic Hyperthermia applications. Vortrag. International Conference on Magnetism 2024, Bologna, Italy; 2024.

Pansegrau, K., Jaufenthaler, A., Wiekhorst, F., Baumgarten, D. Temperature Effects on Magnetorelaxometry Parameters of Immobilized Magnetic Nanoparticles. Vortrag. 14th International Conference on the Scientific and Clinical Applications of Magnetic Carriers 2024, Barcelona, Spanien; 2024. 

Wolfschwenger, M., Jaufenthaler, A., Hanser, F., Baumgarten, D. Molecular Dynamics Simulation of Interacting Magnetic Nanoparticles in Viscous Media. Vortrag. 14th International Conference on the Scientific and Clinical Applications of Magnetic Carriers 2024, Barcelona, Spanien; 2024.

Arsalani, S., Wiekhorst, F., Baumgarten, D., Körber, R. Towards Quantitative Imaging of Magnetic Nanoparticle Flow by MRXI. Vortrag. 14th International Conference on the Scientific and Clinical Applications of Magnetic Carriers 2024, Barcelona, Spanien; 2024.

Jaufenthaler, A., Baumgarten, D. A portable system for unshielded magnetorelaxometry imaging of magnetic nanoparticles. Vortrag. 14th International Conference on the Scientific and Clinical Applications of Magnetic Carriers, Barcelona, Spanien; 2024.

Jaufenthaler, A., Baumgarten, D. Quantitative magnetic nanoparticle imaging with magnetorelaxometry in unshielded environments. Vortrag. 9th European Medical and Biological Engineering Conference, Portoroz, Slowenien; 2024. 

Schweitzer, M., Ostheimer, P., Lins, A., Romano, V., Steger, B., Baumgarten, D., Augustin, M. Transforming Tele-Ophthalmology: Utilizing Cloud Computing for Remote Eye Care. In: Hayn, Dieter, Pfeifer, Bernhard, Schreier, Günter, Baumgartner, Martin. Proceedings of the 18th Health Informatics Meets Digital Health Conference. Studies in Health Technology and Informatics. 313. 2024: 215-220. doi: 10.3233/SHTI240040. Link zur Publikation

Fischer, G., Baumgarten, D., Kofler, M. Assessment of near 600 Hz High Frequency Oscillations by N-Interval Fourier Transform Analysis. Vortrag. Gemeinsame Jahrestagung der ÖGfE und OeGKN 2024, Wien, Österreich; 2024.

Fischer, G., Baumgarten, D., Kofler, M. Novel Real Time Digital Signal-to-Noise Management of Median Nerve Somatosensory Evoked Potentials. Vortrag. Tom Wahlig Symposium 2024, Erlangen, Deutschland; 2024.

Maurer, M., Baumgarten, D., Vorwerk, J. Comparison of CNN based EEG classification in sensor and source space. Vortrag. Workshop Biosignals 2024, Göttingen; 2024.

Pansegrau, K., Jaufenthaler, A., Wiekhorst, F., Baumgarten, D. Temperature Influence on the Relaxation Behavior of Immobilized Magnetic Nanoparticles. Vortrag. 4th Nanomaterials Applied to Life Sciences (NALS 2024), Granada, Spanien; 2024.

Handler, M., Vey, B., Loos, E., Devocht, E., van Boxel, S., van de Berg, R., Baumgarten, D. Influence of Varying Positions and Orientations of Vestibular Implant Electrode Contacts on Simulated Neural Stimulation Outcome. Poster. ARO’s 47th Annual MidWinter Meeting in Anaheim 2024, Anaheim, USA; 2024.

Vey, B., Handler, M., Baumgarten, D. Computer Simulation of Combined Stimulation of the Cochlear and Vestibular Systems Employing Realistic Human Inner Ear Anatomy and Multi-Compartment Nerve Models. Poster. ARO’s 47th Annual MidWinter Meeting in Anaheim 2024, Anaheim, USA; 2024.

Ostheimer, P., Steger, B., Romano, V., Augustin, M., Baumgarten, D. Automated ocular surface classification for redness extraction of standardized ocular surface photographs. Vortrag. 2023 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT), Vienna; 2023.

Ibrahim, R., Eichberger, P., Baumgarten, D., Ganswindt, U. An evaluation of the accuracy of the Elekta cone-beam CT software XVI’s MV radiation isocentre calculations. Vortrag. Jahrestagung der Österreichischen Gesellschaft für Medizinische Physik 2023, Salzburg, Österreich; 2023.

Handler, M., Vey, B., Loos, E., Devocht, E., van Boxel, S., van de Berg, R., Baumgarten, D. Effects of Varying Electrode Positions in the Ampullae on Simulated Neural Activation of Nerves in the Inner Ear. Vortrag. 2023 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT), Vienna, Austria; 2023.

Vey, B., Handler, M., Baumgarten, D. Computer Simulation of Electrical Stimulation of the human inner ear: effects of combined stimulation of the cochlear and vestibular systems employing multi-compartment nerve models. Vortrag. 2023 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT), Vienna, Austria; 2023. 

 

Monographs

Schwendinger, T. Simulation von Tiefer Hirnstimulation mit einem Mixed-FEM-Ansatz. Masterarbeit. Hall in Tirol, Innsbruck: UMIT TIROL, University of Innsbruck; 2024

Vey, B. Simulation of neural activation and electrically evoked compound action potentials during combined cochlear-vestibular stimulation. Masterarbeit. Hall in Tirol, Innsbruck: UMIT TIROL, University of Innsbruck; 2024