Biomedical Computer Science and Mechatronics

Publications 2024/2025

Full Papers

Yan, R., Hossain, M. B., Min, J. E., Kurz, M., Smith, K., Piske, M., Seaman, S., Bach, P., Karim, E., Platt, R. W., Siebert, U., Socías, M. E., Xie, H., Nosyk, B. Comparative effectiveness of alternative initial doses of opioid agonist treatment for individuals with opioid use disorder: a protocol for a retrospective population-based study using target trial emulation in British Columbia, Canada. BMJ Open. 2025; 15 (9):e098990. doi: 10.1136/bmjopen-2025-098990. Link zur Publikation

Kurz, M., Guerra-Alejos, B., Min, J., Seaman, S., Piske, M., Bach, P., Bruneau, J., Greenland, S., Gustafson, P., Kampman, K., Karim, M., Korthuis, P., Platt, R., Siebert, U., Socías, M., Wood, E., Nosyk, B. Comparative effectiveness of urine drug testing schedules alongside opioid agonist treatment: Emulation of a population-based target trial in British Columbia, Canada. Addiction. 2025; 120(12):2435-2447. doi: 10.1111/add.70171. Link zur Publikation

Duschek, S., Piwkowski, P., Rainer, T., Vorwerk, J., Riml, L., Ettinger, U. Neural Correlates of Proactive and Reactive Control Investigated Using a Novel Precued Antisaccade Paradigm. Psychophysiology. 2025; 62 (2):e70015. doi: 10.1111/psyp.70015. Link zur Publikation

Höltershinken, M. B., Lange, P., Erdbrügger, T., Buschermöhle, Y., Wallois, F., Buyx, A., Pursiainen, S., Vorwerk, J., Engwer, C., Wolters, C. H. The Local Subtraction Approach for EEG and MEG Forward Modeling. SIAM Journal on Scientific Computing. 2025; 47 (1):B160-B189. doi: 10.1137/23M1582874. Link zur Publikation

Ostheimer, P., Lins, A., Helle, L. A., Romano, V., Steger, B., Augustin, M., Baumgarten, D. Conjunctival Bulbar Redness Extraction Pipeline for High-Resolution Ocular Surface Photography. Translational Vision Science and Technology. 2025; 14(1):6. doi: 10.1167/tvst.14.1.6. Link zur Publikation

Wolfschwenger, M., Jaufenthaler, A., Hanser, F., Gamper, J., Hofer, T. S., Baumgarten, D. Molecular dynamics modelling of interacting magnetic nanoparticles for investigating equilibrium and dynamic ensemble properties. Applied Mathematical Modelling. 2024; 136:115624. doi: 10.1016/j.apm.2024.07.031. Link zur Publikation

Nosyk, B., Min, J., Homayra, F., Kurz, M., Guerra-Alejos, B., Yan, R., Piske, M., Seaman, S., Bach, P., Greenland, S., Karim, M., Siebert, U., Bruneau, J., Gustafson, P., Kampman, K., Korthuis, P., Loughin, T., McCandless, L., Platt, R., Schnepel, K., Socias, M. Buprenorphine/Naloxone vs Methadone for the Treatment of Opioid Use Disorder. JAMA. 2024; 332(21):1822-1831. doi: 10.1001/jama.2024.16954. Link zur Publikation

 

Conference Constributions

Maurer, M., Baumgarten, D., Vorwerk, J. Can Source Estimation improve Lower Limb Motor Imagery EEG Classification? In: Müller, Bert, Schkommodau, Erik, Hradetzky, David. BMT 2025 Abstract Booklet (2025 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering). Biomedical Engineering. 70 (s1). Muttenz/Basel, Switzerland: De Gruyter; 2025: art.-172. doi: 10.1515/bmt-2025-1001. Link zur Publikation

Pansegrau, K., Radon, P., Jaufenthaler, A., Wiekhorst, F., Baumgarten, D. Comparison of the influence of different MNP immobilization methods on the temperature effect on MRX relaxation parameters. In: Müller, Bert, Schkommodau, Erik, Hradetzky, David. BMT 2025 Abstract Booklet (2025 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering). Biomedical Engineering. 70 (s1). Muttenz/Basel, Switzerland: De Gruyter; 2025: art.-212. doi: 10.1515/bmt-2025-1001. Link zur Publikation

Handler, M., Vey, B., Glueckert, R., Saba, R., Garnham, C., Baumgarten, D. Computer Simulation of Combined Vestibular/Cochlear Implant Stimulation for the Analysis of Cross-Talk and Neuronal Responses. 15th Vienna International Workshop on Functional Electrical Stimulation and 30 Years’ IFESS Anniversary. 2025: 89.

Vey, B., Handler, M., Glueckert, R., Saba, R., Garnham, C., Baumgarten, D. Investigating the Effects of Inter-Phase Gap on ECAPs and AGFs with a Combined Cochlear and Vestibular Inner Ear Model. In: Müller, Bert, Schkommodau, Erik, Hradetzky, David. BMT 2025 Abstract Booklet (2025 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering). Biomedical Engineering. 70 (s1). Muttenz/Basel, Switzerland: De Gruyter; 2025: art.-173. doi: 10.1515/bmt-2025-1001. Link zur Publikation

Handler, M., Vey, B., Glueckert, R., Saba, R., Garnham, C., Baumgarten, D. In-Silico Investigation of Multipolar Stimulation in Inner Ear Implants for Improving Selective Stimulation. In: Müller, Bert, Schkommodau, Erik, Hradetzky, David. BMT 2025 Abstract Booklet (2025 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering). Biomedical Engineering. 70 (s1). Muttenz/Basel, Switzerland: De Gruyter; 2025: art.-353. doi: 10.1515/bmt-2025-1001. Link zur Publikation

Handler, M., Baumhoff, P., Konerding, W., Vey, B., Kral, A., Baumgarten, D. Electrical Model of the Guinea Pig Head for In-Silico Analysis of Neural Stimulation by Cochlear Implants. 2025 Conference on Implantable Auditory Prostheses (CIAP 2025). Tahoe City, California: CIAP; 2025: 274.

Vey, B., Handler, M., Baumgarten, D. ECAP Simulation of Combined Cochlear and Vestibular Stimulation Employing Realistic Human Inner Ear Anatomy. Abstract Book, ARO 48th Annual MidWinter Meeting. Orlando, Florida: Association for Research in Otolaryngology (ARO); 2025: 751. 

Vey, B., Handler, M., Glueckert, R., Baumgarten, D. Simulation of neural activation and electrically evoked compound action potentials during combined cochlear-vestibular stimulation. Abstracts of the 2024 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT). Biomedical Engineering. 69 (s1). Graz, Austria: De Gruyter; 2024: 12. doi: 10.1515/bmt-2024-1001. Link zur Publikation

Mitra, M., Jaufenthaler, A., Birkl, C., Gizewski, E., Baumgarten, D. MR Magnetic Nanoparticle Imaging and Quantification Performance Study for Magnetic Hyperthermia. Abstracts of the 2024 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT). Biomedical Engineering. 69 (s1). Graz, Austria: De Gruyter; 2024: 32. doi: 10.1515/bmt-2024-1001. Link zur Publikation

Handler, M., Baumhoff, P., Konerding, W., Vey, B., Kral, A., Baumgarten, D. A workflow for preprocessing incomplete segmentations as basis for inner ear stimulation models. Abstracts of the 2024 Annual Meeting of the Austrian Society for Biomedical Engineering (ÖGBMT). Biomedical Engineering. 69 (s1). Graz, Austria: De Gruyter; 2024: 24. doi: 10.1515/bmt-2024-1001. Link zur Publikation

 

Letters and Reports

Medani, T., Pursiainen, S., Piastra, M., Vorwerk, J., Leahy, R. M. Forward and inverse solvers in multi-modal electric and magnetic brain imaging: theory, implementation, and application. Frontiers in Human Neuroscience. 2025; 19:1629489. doi: 10.3389/fnhum.2025.1629489. Link zur Publikation